PUBLICATIONS

41.
Shanshan Li, Qichen Cao, Weidi Xiao, Yufeng Guo, Yunfei Yang, Xiaoxiao Duan, Wenqing Shui, Optimization of Acquisition and Data-Processing Parameters for Improved Proteomic Quantification by Sequential Window Acquisition of All Theoretical Fragment Ion Mass Spectrometry. Journal of Proteome Research 2017.2.3, 16( 2) : 738~747
40.
Chao Su, Xingjie Gao, Wendong Yang, Yali Zhao, Fu, Xue, Xiaoteng Cui, Chunyan Zhang, Lingbiao Xin, Yuanyuan Ren, Lixin Li, Wenqing Shui, Xi Yang, Minxin Wei, Jie Yang, Phosphorylation of Tudor-SN, a novel substrate of JNK, is involved in the efficient recruitment of Tudor-SN into stress granules. Biochimica et Biophysica Acta: International Journal of Biochemistry and Biophysics 2017.02.14, 1864( 3) : 562~571
39.
Zhucui Li, Yujing Li, Wujiu Chen, Qichen Cao, Yufeng Guo, Ni Wan, Jiang, Xiaolong, Yinjie J Tang, Qinhong wang, Wenqing Shui, Integrating MS1 and MS2 Scans in High-Resolution Parallel Reaction Monitoring Assays for Targeted Metabolite Quantification and Dynamic 13C-Labeling Metabolism Analysis.. Analytical Chemistry 2017.1.3, 89( 1) : 877~885
38.
Zhucui Li, Afang Yang, Yujing Li, Pingping Liu, Zhidan Zhang, Xueli Zhang, Wenqing Shui, Targeted Cofactor Quantification in Metabolically Engineered E. coli Using Solid Phase Extraction and Hydrophilic Interaction Liquid Chromatography-Mass Spectrometry. Journal of Chromatography B 2016.3.1, 1014: 107~115
37.
Xiong Yun, Yufeng Guo, Weidi Xiao, Qichen Sao, Shanshan Li, Xianni Qi, Zhidan Zhang, Qinhong Wang, Wenqing Shui, An NGS-Independent Strategy for Proteome-Wide Identification of Single Amino Acid Polymorphisms by Mass Spectrometry. Analytical Chemistry 2016.1.25, 88(5)
36.
Shanshan Li, Yong Zhang, Jihua Wang, Yunfei Yang, Chen Miao, Yufeng Guo, Zhidan Zhang, Qichen Cao, Wenqing Shui, Combining Untargeted and Targeted Proteomic Strategies for Discrimination and Quantification of Cashmere Fibers. PLos One 2016.1.20, 11(11)
35.
Tian Hua, Kiran Vemuri, Mengchen Pu, Lu Qu, Gye Won Han, Yiran Wu, Suwen Zhao, Wenqing Shui, Shanshan Li, Anisha Korde, Robert B. Laprairie, Edward L. Stahl, Jo-Hao Ho, Nikolai Zvonok, Han Zhou, Irina Kufareva, Beili Wu, Qiang Zhao, Michael A. Hanson, Laura M. Bohn, Alexandros Makriyanniss, Raymond C. Stevens, Zhi-Jie Liu, Crystal Structure of the Human Cannabinoid Receptor CB1. Cell 2016.10.20, 167( 3) : 750~762.e14
34.
Xu Fu, Zhihua Wang, Lixin Li, Shishang Dong, Zhucui Li, Zhenzuo Jiang, Yuefei Wang, Wenqing Shui, Novel Chemical Ligands to Ebola Virus and Marburg Virus Nucleoproteins Identified by Combining Affinity Mass Spectrometry and Metabolomics Approaches.. Scientific Reports 2016.7.12, 6: 29680~29680
33.
Youguang Luo, Jie Ran, Songbo Xie, Yunfan Yang, Jie Chen, Shanshan Li, Wenqing Shui, Dengwen Li, Min Liu, Jun Zhou, ASK1 controls spindle orientation and positioning by phosphorylating EB1 and stabilizing astral microtubules. Cell Discov 2016.01.01, 2: 16033~16033
32.
Wenqing Shui, Yun Xiong, Weidi Xiao, Xianni Qi, Yong Zhang, Yuping Lin, Yufeng Guo, Zhidan Zhang, Qinhong Wang, Yanhe Ma, Understanding the mechanism of thermotolerance distinct from heat shock response through proteomic analysis of industrial strains of Saccharomyces cerevisiae. Molecular & Cellular Proteomics 2015.7.12, 14( 7) : 1885~1897
31.
Ningning Liu, Yun Xiong, Shanshan Li, Yiran Ren, Qianqian He, Siqi Gao, Jun Zhou, Wenqing Shui, New HDAC6-mediated deacetylation sites of tubulin in the mouse brain identified by quantitative mass spectrometry. Scientific Reports 2015.11.19, 5: 16869
30.
Shanshan Qin, Yiran Ren, Xu Fu, Jie Shen, Quan Wang, Xin Bi, Wenjing Liu, Lixin Li, Guangxin Liang, Cheng Yang, Wenqing Shui, Multiple ligand detectionand affinity measurement by ultrafiltration and mass spectrometry analysisapplied to fragment mixture screening. Analytica Chimica Acta 2015.5.20, 886: 98~106
29.
Xianfei He, Zhu Liu, Qianqian He, Juan Qin, Ningning Liu, Linlin Zhang, Dengwen Li, Jun Zhou, Wenqing Shui, Min Liu, Identification of novelmicrotubule-binding proteins by taxol-mediated microtubule stabilization andmass spectrometry analysis. Thoracic Cancer 2015.5.11, 6( 5) : 649~654
28.
Ningning Liu, Yun Xiong, Yiran Ren, Linlin Zhang, Xianfei He, Xincheng Wang, Min Liu, Dengwen Li, Wenqing Shui, Jun Zhou, Proteomic Profiling and Functional Characterization of Multiple Post-Translational Modifications of Tubulin. Journal of proteome research 2015.7.13, 14( 8) : 3292~3304
27.
Xin Chen, Shanshan Qin, Shuai Chen, Jinlong Li, Lixin Li, Zhongling Wang, Quan Wang, Jianping Lin, Cheng Yang, Wenqing Shui, A Ligand-observed Mass Spectrometry Approach Integrated into the Fragment Based Lead Discovery Pipeline. Scientific Reports 2015.2.10, 5: 8361
26.
Shanshan Liu, Xin Chen, Zhihui Yan, Shanshan Qin, Jinhua Xu, Jianping Lin, Cheng Yang, Wenqing Shui, Exploring skyline for both MSE-based label-free proteomics and HRMS quantitation of small molecules. Proteomics 2014.2.14, 14( 2-3) : 169~180
25.
Yilin Wang, Zhucui Li, Dan Liu, Jinhua Xu, Xiaochao Wei, Liming Yan, Cheng Yang, Zhiyong Lou, Wenqing Shui, Assessment of BAK1 activity in different plant receptor-like kinase complexes by quantitative profiling of phosphorylation patterns. Journal of Proteomics 2014.6.20, 108: 484~493
24.
Dengwen Lii, Jinmin Gao, Yunfan Yang, Lei Sun, Shaojun Suo, Youguang Luo, Wenqing Shui, Jun Zhou, Min Liu, CYLD coordinateswith EB1 to regulate microtubule dynamics and cell migration. Cell Cycle 2014.1.21, 13( 6) : 974~983
23.
Jie Chen, Youguang Luo, Lixin Li, Jie Ran, Xincheng Wang, Siqi Gao, Min Liu, Dengwen Li, Wenqing Shui, Jun Zhou, Phosphoregulation of the dimerization and functions of end-binding protein 1. Protein & Cell 2014.7.23, 5( 10) : 795~799
22.
Linlin Zhang, Shanshan Liu, Ningning Liu, Yong Zhang, Min Liu, Dengwen Li, Edward Seto, Tso-Pang Yao, Wenqing Shui, Jun Zhou, Proteomic identification and functional characterization of MYH9, Hsc70, and DNAJA1 as novel substrates of HDAC6 deacetylase activity. Protein & Cell 2014.8.25, 6( 1) : 42~54
21.
Xiaodong Sun, Min Liu, Jihui Hao, Dengwen Li, Youguang Luo, Xiuchao Wang, Yunfan Yang, Fang Li, Wenqing Shui, Quan Chen, Jun Zhou, Parkin deficiency contributes to pancreatictumorigenesis by inducing spindle multipolarityand misorientation . Cell Cycle 2013.3.7, 12( 7) : 1133~1141
20.
Xin Chen, Lixin Li, Shuai Chen, Yintong Xu, Qiang Xia, Yu Guo, Xiang Liu, Yanting Tang, Tanjie Zhang, Yue Chen, Cheng Yang, Wenqing Shui, Identification of Inhibitors of the Antibiotic-Resistance Target New Delhi Metallo-β-lactamase 1 by both Nanoelectrospray Ionization Mass Spectrometry and Ultrafiltration Liquid Chromatography/Mass Spectrometry Approaches. Analytical Chemistry 2013.8.20, 85( 16) : 7957~7965
19.
Jinhua Xu, Xiaochao Wei, Limin Yan, Dan Liu, Yuanyuan Ma, Yu Guo, Chune Peng, Honggang Zhou, Cheng Yang, Zhiyong Lou, Wenqing Shui, Identification and functional analysis of phosphorylation residues of the Arabidopsis BOTRYTIS-INDUCED KINASE1. Protein & Cell 2013.10.8, 4( 10) : 771~781
18.
Yangguang Li, Ti Wen, Minzhi Zhu, Lixin Li, Jun Wei, Xiaoli Wu, Mingzhou Guo, Shuangping Liu, Huiyuan Zhao, Siyuan Xia, Weili Huang, Puyue Wang, Zhenzhou Wu, Liqing Zhao, Wenqing Shui, Zheng Li, Zhinan Yin, Glycoproteomic analysis of tissues from patients with colon cancer using lectin microarrays and nanoLC-MS/MS. Molecular Biosystems 2013.7.9, 9( 7) : 1877~1887
17.
Jie Hao, Wei Li, Jiameng Dan, Xiaoying Ye, Fang Wang, Xinhai Zeng, Lei Wang, Huiyong Wang, Yang Cheng, Lin Liu, Wenqing Shui, Reprogramming- and pluripotency-associated membrane proteins in mouse stem cells revealed by label-free quantitative proteomics. Journal of Proteomics 2013.6.28, 86: 70~84
16.
Liming Yan, Yuanyuan Ma, Dan Liu, Xiaochao Wei, Yuna Sun, Xiaoyue Chen, Huadong Zhao, Jingwen Zhou, Zhiyong Wang, Wenqing Shui, Zhiyong Lou, Structural basis for the impact of phosphorylation on the activation of plant receptor-like kinase BAK1. Cell Research 2012.5.1, 22: 1034~1038
15.
Yu Guo, Jing Wang, Guojun Niu, Wenqing Shui, Yuna Sun, Honggang Zhou, Yaozhou Zhang, Cheng Yang, Zhiyong Lou, Zihe Rao, A Structural View of the Antibiotic Degradation Enzyme NDM-1 from a Superbug. Protein & cell 2011.6.2, 2( 5) : 384~394
14.
Wenqing Shui, Christopher J. Petzold, Alyssa Redding, Jun Liu, Austin Pitcher, Leslie Sheu, Tsung-yen Hsieh, Jay D. Keasling, Carolyn R. Bertozzi, Organelle Membrane Proteomics Reveals New Insights on Phagosome Maturation Mediated by Mycobacterial Lipoglycans. Journal of Proteome Research 2011.1.7, 10: 339~348
13.
Wenqing Shui, Song Lin, Allen Zhang, Yan Chen, Yingying Huang, Mark Sanders, Driving efficiency in a high-throughput metabolic stability assay through a generic high-resolution accurate mass method and automated data mining. Protein & Cell 2011.8.4, 2( 8) : 680~688
12.
Peng Wu, Wenqing Shui, Brian L. Carlson, Nancy Hu, David Rabuka, Julia Lee, Carolyn R. Bertozzi, Site-specific chemicalmodification of recombinant proteins produced in mammalian cells by using thegenetically encoded aldehyde tag. Proceedings of the national academy of sciences 2009.3.3, 106( 9) : 3000~3005
11.
Yinjie J. Tang, Wenqing Shui, Samuel Myers, Xueyang Feng, Carolyn Bertozzi, Jay D. Keasling, Central metabolism in Mycobacterium smegmatis during the transition from O2-rich to O2-poor conditions as studied by isotopomer-assisted metabolite analysis. Biotechnology Letter 2009.4.9, 31: 1233~1240
10.
Wenqing Shui, Sarah A. Gilmore, Leslie Sheu, Jun Liu, Jay D. Keasling, Carolyn R. Bertozzi, Quantitative Proteomic Profiling of Host-Pathogen Interactions: The Macrophage Response to Mycobacterium tuberculosis Lipids. Journal of Proteome Research 2008.11.24, 8( 1) : 282~289
9.
Wenqing Shui, Leslie Sheu, Jun Liu, Brian Smart, Christopher J. Petzold, Tsungyen Hsieh, Austin Pitcher, Jay D. Keasling, Carolyn R. Bertozzi, MembraneProteomics of Phagosomes Suggests a Connection to Autophagy. Proceedings of the National Academy of Sciences 2008.11.4, 105( 44) : 16952~16957
8.
Wenqing Shui, Jie Fan, Pengyuan Yang, Chunli Liu, Jianjun Zhai, Jie Lei, Yan, Dongyuan Zhao, Xian Chen, Nanopore-based proteolytic reactorfor sensitive and comprehensive proteomic analyses. Analytical Chemistry 2006.6.8, 78( 14) : 4811~4819
7.
Fan Jie, Wenqing Shui, Pengyuan Yang, Xiaoyan Wang, Yunmin Xu, Songhai Wang, Xian Chen, Dongyuan Zhao, Mesoporous silicananoreactors for highly efficient proteolysis. Chemistry-European Journal 2005.7.7, 11( 18) : 5391~5396
6.
Jianjun Zhai, Wenqing Shui, Xuejiao Xu, Yanking Yu, Huimin Bao, Xian Chen, Pengyuan Yang, A modified nanospray tipcoupled to a mass spectrometer for analyzing enzymatic peptides. Rapid Communications in Mass Spectrometry 2004.5.30, 18( 10) : 1177~1179
5.
Wenqing Shui, Yinkun Liu, Huizhi Fan, Huimin Bao, Shufang Liang, Pengyuan Yang, Xian Chen, Enhancing TOF/TOF-basedde novo sequencing capability for high throughput protein identification with amino acid-coded mass tagging. Journal of Proteome Research 2004.12.8, 4( 1) : 83~90
4.
Wenqing Shui, Yanling Yu, Xuejiao Xu, Zhenyu Huang, Guobing Xu, Pengyuan Yang, Micro-electrospray with stainless steel emitters. Rapid Communications in Mass Spectrometry 2003.5.6, 17( 14) : 1541~1547
3.
Feng Zhou, Wenqing Shui, Yu Lu, Pengyuan Yang, Yinglong Guo, High accuracy mass measurement of peptides with internal calibration using a dual electrosprayionization sprayer system for protein identification. Rapid Communications in Mass Spectrometry 2002.3.30, 16( 6) : 505~511
2.
Junfei Wei, Wenqing Shui, Feng Zhou, Yu Lu, Kankai Chen, Guobing Xu, Pengyuan Yang, Naturally and externally pulsed electrospray. Mass Spectrometry Review 2002.4.24, 21( 3) : 148~162
1.
Yu Lu, Feng Zhou, Wenqing Shui, Liping Bian, Yinglong Guo, Pengyuan Yang, Pulsed electrospray for mass spectrometry. Analytical Chemistry 2001.10.1, 73( 19) : 4748~4753